Bam Open Source Projects

C library for high-throughput sequencing data formats

a pytorch lib with state-of-the-art architectures, pretrained models and real-time updated results

Tools for working with SAM/BAM data

A Java API for high-throughput sequencing data (HTS) formats.

Syntax highlighting for computational biology

Win 10/11 related research

Dashboard composition tooling based on the Uberfire framework

viral-ngs: command line tools and wrappers for processing raw viral genomic data

A modern compressor for genomic files (FASTQ, SAM/BAM/CRAM, VCF, FASTA, GFF/GTF/GVF, 23andMe...), up to 5x better than gzip and faster too

A high performance and compression ratio compressor for genomic data, powered by GTXLab of Genetalks.

Creating alignment plots from bam files

Learning the Sequence Alignment/Map format

VerifyBamID2: A robust tool for DNA contamination estimation from sequence reads using ancestry-agnostic method.